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PDBEB 06/07


Moura GR, Pinheiro M, Freitas A, Oliveira JL, Frommlet JC, Carreto L, Soares AR, Bezerra AR, Santos MA. (2011) Species-specific codon context rules unveil non-neutrality effects of synonymous mutations. PLoS One. 2011;6(10):e26817. doi: 10.1371/journal.pone.0026817. Epub 2011 Oct 26.

Soares AR, Pereira PM, Santos MA. Next generation sequencing of miRNAs with Roche 454 GS-FLX Technology - steps for a successful application (2012) Methods Mol Biol. 2012;822:189-204. doi: 10.1007/978-1-61779-427-8_13.

Pereira PM, Marques JP, Soares AR, Carreto L, Santos MA. (2010) MicroRNA expression variability in human cervical tissues. PlosOne 26;5(7).

Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA. (2009) Parallel DNA pyrosequencing unveils new zebrafish microRNAs. BMC Genomics 10:195. IF

Rosa AI
, Gonçalves J, Cortes L, Bernardino L, Malva JO, Agasse F. (2010) The angiogenic factor angiopoietin-1 is a proneurogenic peptide on subventricular zone stem/progenitor cells, J Neurosci.

Maria Francisca Eiriz, Sofia Grade, Alexandra Rosa, Sara Xapelli, Liliana Bernardino, Fabienne Agasse and João O. Malva, Functional evaluation of neural stem cell differentiation by single cell calcium imaging, Curr Stem Cell Res Ther. 2011 Sep;6(3):288-96.

Gaspar JM, Baptista FI, Cristovão A, Santos PF, Kofalvi A and Ambrósio AF. (2011) Diabetes induces early transient changes in the content of vesicular transporters and no major effects in neurotransmitter release in hippocampus and retina. Brain Res.  1383: 257-69.

Gaspar JM, Castilho AF, Baptista FI, Liberal J and Ambrósio AF. (2010) Long-term exposure to high glucose induces changes in the content and distribution of some exocytotic proteins in cultured hippocampal neurons. Neuroscience. 171(4):981-92

Gaspar JM, Baptista FI, JGalvão J, Castilho AF, Cunha RA and Ambrósio AF. (2010) Diabetes differentially affects the content of exocytotic proteins in hippocampal and retinal nerve terminals. Neuroscience. 2010 169(4):1589-600

Santiago AR, Gaspar JM, Baptista FI, Cristóvão AJ, Santos PF, Kamphuis W, and Ambrósio AF. (2009) Diabetes Induces   Changes on the Levels of Ionotropic Glutamate Receptors in the Rat Retina.  Mol. Vis. 15:1620-30.

Neves JF*, Mahtani-Patching J*, Pang DJ, Stoenchev KV, Aguirre-Blanco AM, Silva-Santos B, Pennington DJ. (2011) PreTCR and TCR{gamma}{delta} Signal Initiation in Thymocyte Progenitors Does Not Require Domains Implicated in Receptor Oligomerization. Science Signalling; 19;4(182):ra47.
* These authors contributed equally to this work.
 
Ribot JC, deBarros A, Pang DJ, Neves JF, Peperzak V, Roberts SJ, Girardi M, Borst J, Hayday AC, Pennington DJ, Silva-Santos B. (2009) CD27 is a thymic determinant of the balance between interferon-γ- and interleukin 17-producing γδ T cell subsets. Nature Immunology; 10(4):427-36.

Grade S, Agasse F, Bernardino L, Malva JO (2012) Functional identification of neural stem cell-derived oligodendrocytes. In: Somatic Stem Cells: Methods and Protocols (Singh, SR, ed), 879: 165-78. Humana Press; Springer Science+Business Media.

Eiriz MF, Grade S, Rosa A, Xapelli S, Bernardino L, Agasse F, Malva JO. (2011) Functional evaluation of neural stem cell differentiation by single cell calcium imaging. Curr Stem Cell Res Ther. 6:288-296.
 
De Melo Reis RA, Schitine CS, Kofalvi A, Grade S, Cortes L, Gardino PF, Malva JO, de Mello FG. (2011) Functional identification of cell phenotypes differentiating from mice retinal neurospheres using single cell calcium imaging. Cell Mol Neurobiol 31:835-846.

Grade S, Agasse F, Bernardino L, Silva CG, Cortes L, Malva JO. (2010) Functional identification of neural stem cell-derived oligodendrocytes by means of calcium transients elicited by thrombin. Rejuvenation Res 13:27-37.

Grade S, Agasse F, Bernardino L, Malva JO (2010) Method for the functional identification of SVZ-derived oligodendrocytes based on selective response to thrombin and utilization thereof. WIPO, WO 2010/046876-A1.
 
Bernardino L, Agasse F, Silva B, Ferreira R, Grade S, Malva JO. (2008) Tumor Necrosis Factor-α modulates survival, proliferation, and neuronal differentiation in neonatal subventricular zone cell cultures. Stem Cells 26: 2361-2371.
 
Agasse F, Bernardino L, Kristiansen H, Christiansen SH, Ferreira R, Silva B, Grade S, Woldbye D, Malva JO. (2008) Neuropeptide Y promotes neurogenesis in murine subventricular zone. Stem Cells 26:1636-1645.
 
Agasse F, Bernardino L, Silva B, Ferreira R, Grade S, Malva JO. (2008) Response to histamine allows the functional identification of neuronal progenitors, neurons, astrocytes, and immature cells in subventricular zone cell cultures. Rejuvenation Res 11:187-200.
 
Xapelli S, Bernardino L, Ferreira R, Grade S, Silva AP, Salgado JR, Cavadas C, Grouzmann E, Poulsen FR, Jakobsen B, Oliveira CR, Zimmer J, Malva JO. (2008) Interaction between neuropeptide Y (NPY) and brain-derived neurotrophic factor in NPY-mediated neuroprotection against excitotoxicity: a role for microglia. Eur J Neurosci 27:2089–2102.
 
Simões PF, Silva AP, Pereira FC, Marques E, Grade S, Milhazes N, Borges F, Ribeiro CF, Macedo TR (2007) Methamphetamine induces alterations on hippocampal NMDA and AMPA receptor subunit levels and impairs spatial working memory. Neuroscience 150: 433-441.



 
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