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Modelling of Biological Systems
 
April 16 - 20
Armindo Salvador
Monday, April 16
(Armindo Salvador, Center for Neuroscience and Cell Biology, Portugal)


10:00-10:50 Graphical representation of networks
11:00-11:50 Mathematical representation of processes and systems
11:50-13:00 Lunch
13:00-15:00 S-systems
15:20-17:20 Practice


Tuesday, April 17
(Rui Alves, University of Lleida, Spain)


09:00-09:50 Alternative designs: Mathematicallly controlled comparisons
10:00-10:50 Alternative designs: Statistical controlled comparisons
11:00-11:50 Quantitative design of gene expression programs
11:50-13:00 Lunch
13:00-17:00 Practice


Wednesday, April 18
(Michael Savageau, University of California at Davis, USA)


09:00-09:50 Alternative molecular modes of gene control
10:00-10:50 Demand theory: relating mechanism to environment
11:10-12:00 Coupling of expression in gene circuits
12:10-13:00 Continuous vs discontinuous switching of gene expression
13:00-14:00 Lunch
14:00-17:00 Practice


Thursday, April 19
(Jorge Carneiro, Gulbenkian Institute of Science, Portugal)


09:00-09:50 Noise in biochemical processes: basic concepts and implications
10:00-10:50 Noise in biochemical processes: experimental observations
11:00-11:50 Stochastic simulations and methods of analysis
11:50-13:00 Lunch
13:00-14:00 Special seminar: Why do protein abundances in cell populations have a lognormal distribution?
14:00-17:00 Practice


Friday, April 20

09:00-13:00 Presentation of student projects and discussion of papers
13:00-14:00 Lunch
14:00-14:50 Presentation of student projects and discussion of papers
15:00-15:50 Discussion of modelling approaches
16:00-17:00 Friday seminar: Function design in the evolution of gene circuitry” (Michael Savageau)


IMPORTANTE: Materiais e preparativos para o curso
http://cnc.cj.uc.pt/~salvador/kinetic_modeling-pdbeb2007.htm
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