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Bioinformatics
 
April 11 - 13
Armindo Salvador
Wednesday, April 11
(José Leal, Gulbenkian Institute of Science, Portugal)


09:00-09:50 Homology - what it is and how to detect it
10:00-10:50 Phylogenetic inference - looking into the past (not)
11:10-12:00 Prediction of functional associations between proteins
12:10-13:00 Data mining - your favourite gene on the web
13:00-14:00 Lunch
14:00-15:00 Special seminar: The role of gene duplication in the evolution of modularity in protein interaction networks
15:00-17:30 Practice


Thursday, April 12
(Rui Alves, University of Lleida, Spain)


09:00-09:50 Basics of protein structure modeling
10:00-10:50 Basics of RNA structure modeling
11:00-11:50 Basics of In silico protein docking
11:50-13:00 Lunch
13:00-14:00 Special seminar: Integrative in silico metabolic reconstruction
14:00-17:00 Practice


Friday, April 13
(Ralf Hofestadt and Thoralf Töpel, University Bielefeld, Germany)


09:00-09:50 Modeling and simulation of metabolic networks
10:00-10:50 Rule based modeling and simulation
11:10-12:00 Petri net modeling and simulation
12:10-13:00 Case based reasoning for the detection of inborn errors
13:00-14:00 Lunch
14:00-14:50 Practice: Integration of metabolic networks
15:00-15:50 Practice: RAMEDIS information system
16:00-17:00 Friday seminar: Metabolic network analysis and the detection of inborn errors (Ralf Hofestadt)

IMPORTANTE
Materiais e preparativos para o curso.
http://cnc.cj.uc.pt/~salvador/bioinformatics-pdbeb2007.htm
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